pgb_liv\php_ms\Core\PsiXmlTrait

Trait for generic methods that are consistent across all HUPO-PSI standards (e.g.

CvParam)

Author: Andrew Collins

Synopsis

trait PsiXmlTrait {

// constants
const CV_ACCESSION = 'accession';
const CV_VALUE = 'value';
const CV_NAME = 'name';
const CV_UNITACCESSION = 'unitAccession';

// members
private array $cvParamIndex = ;

// methods
public void getCvParamName()
protected void getCvParam()
protected void getUserParam()
protected void getAttributeId()

}

Hierarchy

Used by

Coverage

Methods	0%	0 / 4
Lines	0%	/

Violations

Checkstyle

Line	Column	Severity	Message
99	6	error	Closing brace must be on a line by itself

Constants

Name	Value
CV_ACCESSION	'accession'
CV_VALUE	'value'
CV_NAME	'name'
CV_UNITACCESSION	'unitAccession'

Members

private

$cvParamIndex — array
Builds an index of seen CvParams of Accession -> Name

Methods

protected

getAttributeId()
getCvParam() — Creates an array object from a CvParam object
getUserParam()

public

getCvParamName() — {@inheritdoc}

History

2017-10-25T13:16:01+00:00 (commit #d497193)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
```
Minor code tidy
```