pgb_liv\php_ms\Core\ProteinTrait
Trait for methods associated with attaching a protein to another object
- Author: Andrew Collins
Synopsis
trait ProteinTrait
{
- // members
- private array $proteins = ;
- // methods
- public void addProtein()
- public void addProteinEntry()
- public array getProteins()
Hierarchy
Used by
Coverage
| Methods | 0% | 0 / 3 |
| Lines | 0% | / |
Members
private
- $proteins
—
array
An array of all proteins this object maps to
Methods
public
- addProtein() — Add a new protein mapping to this object.
- addProteinEntry() — This provides direct access to add new entity records and should be used when subclasses are expected
- getProteins() — Gets the set of proteins that this object links to
History
-
2019-04-01T14:53:41+01:00 (commit #cc91234)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Fixed IonSort using outdated methods Fixed digest performing NME on single AA sequences Changed handling of database data, allows for a single sequence to map to multiple formats. Should be better suited for PEFF
-
2017-10-25T11:32:31+01:00 (commit #ccae3f8)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Fixed various documentation and import issues
-
2017-10-23T16:09:20+01:00 (commit #6da06f4)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Added additional tests
-
2017-10-12T11:54:29+01:00 (commit #c1a6d58)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Added support for multiple proteins on peptide identifications Added support for Chromosome objects on proteins Added support for writing proBedFiles