Interfaces
\
| Name | Description |
|---|---|
| Iterator | No description available |
\pgb_liv\php_ms\Core
| Name | Description |
|---|---|
| ModifiableSequenceInterface | Interface to common properties for a modifiable sequence object, such as peptide or protein sequence |
\pgb_liv\php_ms\Core\Database
| Name | Description |
|---|---|
| DatabaseInterface | Common interface methods to database instances. |
\pgb_liv\php_ms\Core\Spectra
| Name | Description |
|---|---|
| IonInterface | Interface to ion properties of an object |
\pgb_liv\php_ms\Reader
| Name | Description |
|---|---|
| MzIdentMlReader1Interface | No description available |
\pgb_liv\php_ms\Reader\FastaEntry
| Name | Description |
|---|---|
| FastaInterface | Interface to fasta file formats |
\pgb_liv\php_ms\Search
| Name | Description |
|---|---|
| SearchInterface | Generic interface to search engine controls |
\pgb_liv\php_ms\Search\Parameters
| Name | Description |
|---|---|
| SearchParametersInterface | Generic interface for accessing search paramaters. |
\pgb_liv\php_ms\Utility\Digest
| Name | Description |
|---|---|
| DigestInterface | Generic interface for all digestion algorithms |
\pgb_liv\php_ms\Utility\Filter
| Name | Description |
|---|---|
| FilterInterface | Interface to common filtering methods |
\pgb_liv\php_ms\Utility\Fragment
| Name | Description |
|---|---|
| FragmentInterface | Generic interface for accessing fragment ion data generated by fragmentation classes (A, B, C, X, Y, Z) |
\pgb_liv\php_ms\Utility\Sort
| Name | Description |
|---|---|
| SortInterface | Interface to common sorting methods |