Interfaces

\

Name Description
Iterator No description available

\pgb_liv\php_ms\Core

Name Description
ModifiableSequenceInterface Interface to common properties for a modifiable sequence object, such as peptide or protein sequence

\pgb_liv\php_ms\Core\Database

Name Description
DatabaseInterface Common interface methods to database instances.

\pgb_liv\php_ms\Core\Spectra

Name Description
IonInterface Interface to ion properties of an object

\pgb_liv\php_ms\Reader

Name Description
MzIdentMlReader1Interface No description available

\pgb_liv\php_ms\Reader\FastaEntry

Name Description
FastaInterface Interface to fasta file formats
Name Description
SearchInterface Generic interface to search engine controls

\pgb_liv\php_ms\Search\Parameters

Name Description
SearchParametersInterface Generic interface for accessing search paramaters.

\pgb_liv\php_ms\Utility\Digest

Name Description
DigestInterface Generic interface for all digestion algorithms

\pgb_liv\php_ms\Utility\Filter

Name Description
FilterInterface Interface to common filtering methods

\pgb_liv\php_ms\Utility\Fragment

Name Description
FragmentInterface Generic interface for accessing fragment ion data generated by fragmentation classes (A, B, C, X, Y, Z)

\pgb_liv\php_ms\Utility\Sort

Name Description
SortInterface Interface to common sorting methods