pgb_liv\php_ms\Writer\MgfWriter::write

Writes the precursor ion and it's associated fragments to the file associated with this instance

Signature

public function write(PrecursorIon $precursor )

Parameters

$precursor — pgb_liv\php_ms\Core\Spectra\PrecursorIon


The precursor ion to write

Test Coverage

Information

• Coverage: 25/29 Lines (86.206896551724%)
• Tests: 3
• Passed: 3 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MgfWriterTest::testCanWriteShortEntry
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MgfWriterTest::testCanWriteLongEntry
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MgfWriterTest::testCanDestruct

Violations

PHPMessDetector

Line	Rule	Message
79 - 81	ElseExpression	The method write uses an else expression. Else is never necessary and you can simplify the code to work without else.

Checkstyle

Line	Column	Severity	Message
78	121	warning	Line exceeds 120 characters; contains 121 characters

Line	Task
61	Validate mandatory/optional fields