pgb_liv\php_ms\Utility\Fragment\FragmentFactory::getMethodFragments

For a specified method, returns the possible fragmentat ion types that may be produced

Signature

public function getMethodFragments(string $method, ModifiableSequenceInterface $sequence )

Parameters

$method — string


The method to get fragment types for

$sequence — pgb_liv\php_ms\Core\ModifiableSequenceInterface


The peptide or protein sequence object to get fragment types for

Returns

array




Test Coverage

Information

• Coverage: 32/32 Lines (100%)
• Tests: 9
• Passed: 9 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodCID
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodHCD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodECD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodETD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodCTD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodEDD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodNETD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodEThcD
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\FragmentTest::testObjectCanGetMethodUnknown