pgb_liv\php_ms\Search\Parameters\MsgfPlusSearchParameters::setProtocolId

Protocol identifier.

Protocols are used to enable scoring parameters for enriched and/or labeled samples. 0: No protocol (Default) 1: Phosphorylation: for phosphopeptide enriched samples 2: iTRAQ: for iTRAQ-labeled samples 3: iTRAQPhospho: for phosphopeptide enriched and iTRAQ-labeled samples

Signature

public function setProtocolId(int $identifier )

Parameters

$identifier — int


Protocol identifier

Test Coverage

Information

• Coverage: 4/4 Lines (100%)
• Tests: 2
• Passed: 2 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetValidProtocolId
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetInvalidProtocolId