pgb_liv\php_ms\Search\Parameters\MsgfPlusSearchParameters::setOutputFile

Filename where the output (mzIdentML 1.1 format) will be written.

File extension must be "mzid" (case sensitive). By default, the output file name will be "[SpectrumFileName].mzid". E.g. for the input spectrum file "test.mzML", the output will be written to "test.mzid" if this parameter is not specified.

Signature

public function setOutputFile(string $filePath )

Parameters

$filePath — string


Full file path to the file that MS-GF+ should create

Test Coverage

Information

• Coverage: 2/2 Lines (100%)
• Tests: 1
• Passed: 1 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetValidOutputFile