pgb_liv\php_ms\Search\Parameters\MsgfPlusSearchParameters::setModificationFile

Modification file name.

ModificationFile contains the modifications to be considered in the search. If -mod option is not specified, standard amino acids with fixed Carboamidomethylation C will be used.

Signature

public function setModificationFile(string $filePath )

Parameters

$filePath — string


Modification file path

Test Coverage

Information

• Coverage: 4/4 Lines (100%)
• Tests: 2
• Passed: 2 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetValidModificationFile
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetInvalidModificationFile