pgb_liv\php_ms\Search\Parameters\MsgfPlusSearchParameters::setEnzyme

Enzyme identifier.

Trypsin (1) will be used by default. 0: unspecific cleavage, 1: Trypsin (default), 2: Chymotrypsin, 3: Lys-C, 4: Lys-N, 5: glutamyl endopeptidase (Glu-C), 6: Arg-C, 7: Asp-N, 8: alphaLP, 9: no cleavage Use 9 for peptidomics studies

Signature

public function setEnzyme(int $enzyme )

Parameters

$enzyme — int


Enzyme identifier

Parent Implementation

• AbstractSearchParameters

Test Coverage

Information

• Coverage: 4/4 Lines (100%)
• Tests: 2
• Passed: 2 (100%)

Tests

• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetValidEnzyme
• [ PASSED ] — pgb_liv\php_ms\Test\Unit\MsgfPlusSearchParametersTest::testCanGetSetInvalidEnzyme