pgb_liv\php_ms\Reader\PxdInfo
- Author: Andrew Collins
Synopsis
- // constants
- const INFO_PATH = 'http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=%s&outputMode=XML&test=no';
- // members
- private $identifier;
- private array $fileList = ;
- // methods
- public void __construct()
- private void parseInfo()
- public void getDatasetFileList()
- public void getIdString()
Coverage
Methods | 0% | 0 / 4 |
Lines | 21.21% | 7 / 33 |
Violations
PHPMessDetector
Line | Rule | Message |
---|---|---|
44 - 46 | ElseExpression | The method __construct uses an else expression. Else is never necessary and you can simplify the code to work without else. |
Constants
Name | Value |
---|---|
INFO_PATH | 'http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=%s&outputMode=XML&test=no' |
Members
private
- $fileList
- $identifier
Methods
private
public
- __construct() — Proteome Exchange identifer to search for.
- getDatasetFileList()
- getIdString()
History
-
2018-01-03T14:46:58+00:00 (commit #583236c)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
no message
-
2017-10-26T14:43:54+01:00 (commit #c473e55)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Removed constant from traits
-
2017-10-25T09:20:00+01:00 (commit #57f57a0)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Minor code tidy
-
2017-10-24T16:05:10+01:00 (commit #b2240f0)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Tweaked PHPMD rules
-
2017-05-10T16:39:50+01:00 (commit #1c94e76)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Replaced SpectraEntry with PrecursorIon and FragmentIon Added internal support for complete decoy proteins
-
2017-04-04T18:36:34+01:00 (commit #9969a66)
Author: Andrew Collins (detritus@blueyonder.co.uk) / Commiter: Andrew Collins (detritus@blueyonder.co.uk)
Added additional validation to MsgfPlus Params
-
2017-03-29T13:46:53+01:00 (commit #50f3da2)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Added initial support for PxdInfo class