pgb_liv\php_ms\Reader\FastaEntry\FastaEntryFactory
Factory method attempts to find the correct parser for known FASTA entry headers
- Author: Andrew Collins
Synopsis
class FastaEntryFactory
{
- // members
- private static array $classes = ;
- private static string $defaultClass = 'pgb_liv\php_ms\Reader\FastaEntry\DefaultFastaEntry';
- // methods
- public static void getParser()
Coverage
| Methods | 0% | 0 / 1 |
| Lines | 0% | 0 / 6 |
Violations
PHPMessDetector
| Line | Rule | Message |
|---|---|---|
| 33 | UnusedPrivateField | Avoid unused private fields such as '$defaultClass'. |
| 47 | UnusedLocalVariable | Avoid unused local variables such as '$defaultClass'. |
Members
private
- $classes
- $defaultClass
Methods
public
History
-
2019-04-01T14:53:41+01:00 (commit #cc91234)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Fixed IonSort using outdated methods Fixed digest performing NME on single AA sequences Changed handling of database data, allows for a single sequence to map to multiple formats. Should be better suited for PEFF