pgb_liv\php_ms\Reader\FastaEntry\EnsembleFastaEntry::getProtein

{@inheritdoc}

Signature

public function getProtein( $identifier, $description )

Parameters

$identifier —

$description —

Defined by Interface

FastaInterface

Test Coverage

Information

• Coverage: 0/61 Lines (0%)
• Tests: 0
• Passed: 0 (0%)

Violations

PHPMessDetector

Line	Rule	Message
70 - 149	CyclomaticComplexity	The method getProtein() has a Cyclomatic Complexity of 16. The configured cyclomatic complexity threshold is 10.
70 - 149	NPathComplexity	The method getProtein() has an NPath complexity of 324. The configured NPath complexity threshold is 200.
78	StaticAccess	Avoid using static access to class '\pgb_liv\php_ms\Core\Database\DatabaseFactory' in method 'getProtein'.
116	StaticAccess	Avoid using static access to class '\pgb_liv\php_ms\Core\Gene' in method 'getProtein'.
117 - 119	ElseExpression	The method getProtein uses an else expression. Else is never necessary and you can simplify the code to work without else.
121	StaticAccess	Avoid using static access to class '\pgb_liv\php_ms\Core\Database\EnsembleGDatabase' in method 'getProtein'.
134	StaticAccess	Avoid using static access to class '\pgb_liv\php_ms\Core\Database\EnsembleTDatabase' in method 'getProtein'.