pgb_liv\php_ms\Core\Entry\DatabaseEntry
A database entry element, allows for assigning an object to a specific database reference
- Author: Andrew Collins
Synopsis
class DatabaseEntry
{
- // members
- private DatabaseInterface $database;
- private $evidence;
- private $sequenceVersion;
- private $entryVersion;
- private $uniqueIdentifier;
- private $name;
- // methods
- public void __construct()
- public DatabaseInterface getDatabase()
- public void setEvidence()
- public void getEvidence()
- public void setSequenceVersion()
- public void getSequenceVersion()
- public void setEntryVersion()
- public void getEntryVersion()
- public void setUniqueIdentifier()
- public void getUniqueIdentifier()
- public void setName()
- public void getName()
Coverage
| Methods | 0% | 0 / 12 |
| Lines | 0% | 0 / 18 |
Members
private
- $database
—
pgb_liv\php_ms\Core\Database\DatabaseInterface
The database object to link - $entryVersion
—
string
The entry version number of this entry. - $evidence
—
string
The level of evidence of that this database on this entry. - $name
—
string
Tne name of this entry - $sequenceVersion
—
string
The sequence version number of this entry. - $uniqueIdentifier
—
string
The unique identifier associated with the database entry.
Methods
public
- __construct() — Creates a new DatabaseEntry object with the specified database
- getDatabase() — Gets the database
- getEntryVersion()
- getEvidence()
- getName()
- getSequenceVersion()
- getUniqueIdentifier()
- setEntryVersion()
- setEvidence()
- setName()
- setSequenceVersion()
- setUniqueIdentifier()
History
-
2019-04-04T11:42:00+01:00 (commit #26a21ad)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Refined database support model Updated PEFF support to be compliant
-
2019-04-01T14:53:41+01:00 (commit #cc91234)
Author: detritus (detritus@blueyonder.co.uk) / Commiter: detritus (detritus@blueyonder.co.uk)
Fixed IonSort using outdated methods Fixed digest performing NME on single AA sequences Changed handling of database data, allows for a single sequence to map to multiple formats. Should be better suited for PEFF