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| <?php | |
| /** | |
| * Copyright 2019 University of Liverpool | |
| * | |
| * Licensed under the Apache License, Version 2.0 (the "License"); | |
| * you may not use this file except in compliance with the License. | |
| * You may obtain a copy of the License at | |
| * | |
| * http://www.apache.org/licenses/LICENSE-2.0 | |
| * | |
| * Unless required by applicable law or agreed to in writing, software | |
| * distributed under the License is distributed on an "AS IS" BASIS, | |
| * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
| * See the License for the specific language governing permissions and | |
| * limitations under the License. | |
| */ | |
| namespace pgb_liv\php_ms\Utility\Sort; | |
| use pgb_liv\php_ms\Core\Spectra\IonInterface; | |
| /** | |
| * Creates an instance of an ion sort class. | |
| * Provides methods for sorting by various properties of an ion. | |
| * | |
| * @author Andrew Collins | |
| */ | |
| class IonSort extends AbstractSort implements SortInterface | |
| { | |
| const DATA_TYPE = '\pgb_liv\php_ms\Core\Spectra\IonInterface'; | |
| const SORT_INTENSITY = 'SortByIntensity'; | |
| const SORT_MZ = 'SortByMassCharge'; | |
| const SORT_MASS = 'SortByMass'; | |
| const SORT_CHARGE = 'SortByCharge'; | |
| protected function sortByIntensity(IonInterface $a, IonInterface $b) | |
| { | |
| if ($a->getIntensity() == $b->getIntensity()) { | |
| return 0; | |
| } | |
| return $a->getIntensity() > $b->getIntensity() ? $this->returnTrue : $this->returnFalse; | |
| } | |
| protected function sortByMass(IonInterface $a, IonInterface $b) | |
| { | |
| if ($a->getMonoisotopicMass() == $b->getMonoisotopicMass()) { | |
| return 0; | |
| } | |
| return $a->getMonoisotopicMass() > $b->getMonoisotopicMass() ? $this->returnTrue : $this->returnFalse; | |
| } | |
| protected function sortByMassCharge(IonInterface $a, IonInterface $b) | |
| { | |
| if ($a->getMonoisotopicMassCharge() == $b->getMonoisotopicMassCharge()) { | |
| return 0; | |
| } | |
| return $a->getMonoisotopicMassCharge() > $b->getMonoisotopicMassCharge() ? $this->returnTrue : $this->returnFalse; | |
| } | |
| protected function sortByCharge(IonInterface $a, IonInterface $b) | |
| { | |
| if ($a->getCharge() == $b->getCharge()) { | |
| return 0; | |
| } | |
| return $a->getCharge() > $b->getCharge() ? $this->returnTrue : $this->returnFalse; | |
| } | |
| } |